3D structure

PDB id
4LT8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.14 Å

Loop

Sequence
CUAAG*CGAAG
Length
10 nucleotides
Bulged bases
4LT8|1|RA|A|1156
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LT8_094 not in the Motif Atlas
Homologous match to IL_7RQB_036
Geometric discrepancy: 0.0567
The information below is about IL_7RQB_036
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_89002.2
Basepair signature
cWW-tWH-L-tHS-cWW
Number of instances in this motif group
20

Unit IDs

4LT8|1|RA|C|998
4LT8|1|RA|U|999
4LT8|1|RA|A|1000
4LT8|1|RA|A|1001
4LT8|1|RA|G|1002
*
4LT8|1|RA|C|1153
4LT8|1|RA|G|1154
4LT8|1|RA|A|1155
4LT8|1|RA|A|1156
4LT8|1|RA|G|1157

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R3
50S ribosomal protein L29
Chain RB
5S ribosomal RNA; 5S rRNA
Chain RU
50S ribosomal protein L19
Chain RV
50S ribosomal protein L20

Coloring options:


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