3D structure

PDB id
4LT8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.14 Å

Loop

Sequence
CGUAAAG*CG
Length
9 nucleotides
Bulged bases
4LT8|1|XA|A|572
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LT8_194 not in the Motif Atlas
Homologous match to IL_4LFB_022
Geometric discrepancy: 0.0778
The information below is about IL_4LFB_022
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_20847.1
Basepair signature
cWW-L-cWW-L-L-R
Number of instances in this motif group
5

Unit IDs

4LT8|1|XA|C|569
4LT8|1|XA|G|570
4LT8|1|XA|U|571
4LT8|1|XA|A|572
4LT8|1|XA|A|573
4LT8|1|XA|A|574
4LT8|1|XA|G|575
*
4LT8|1|XA|C|880
4LT8|1|XA|G|881

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XE
30S ribosomal protein S5
Chain XL
30S ribosomal protein S12
Chain XQ
30S ribosomal protein S17

Coloring options:


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