IL_4LT8_206

3D structure

PDB id

4LT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

GGAGUACG*UGAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LT8_206 not in the Motif Atlas

Homologous match to IL_4LFB_034

Geometric discrepancy: 0.073

The information below is about IL_4LFB_034

Detailed Annotation

8x6 Sarcin-Ricin with inserted Y; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_84044.1

Basepair signature

cWW-tSH-tHH-cSH-tWH-tHS-cWW-L

Number of instances in this motif group

5

Unit IDs

4LT8|1|XA|G|887
4LT8|1|XA|G|888
4LT8|1|XA|A|889
4LT8|1|XA|G|890
4LT8|1|XA|U|891
4LT8|1|XA|A|892
4LT8|1|XA|C|893
4LT8|1|XA|G|894
*
4LT8|1|XA|U|905
4LT8|1|XA|G|906
4LT8|1|XA|A|907
4LT8|1|XA|A|908
4LT8|1|XA|A|909
4LT8|1|XA|C|910

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XL

30S ribosomal protein S12

Chain XQ

30S ribosomal protein S17