3D structure

PDB id
4LT8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.14 Å

Loop

Sequence
CUGUGAAC*GGGAG
Length
13 nucleotides
Bulged bases
4LT8|1|YA|U|2132
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LT8_319 not in the Motif Atlas
Homologous match to IL_7RQB_087
Geometric discrepancy: 0.5103
The information below is about IL_7RQB_087
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4LT8|1|YA|C|2129
4LT8|1|YA|U|2130
4LT8|1|YA|G|2131
4LT8|1|YA|U|2132
4LT8|1|YA|G|2133
4LT8|1|YA|A|2134
4LT8|1|YA|A|2135
4LT8|1|YA|C|2136
*
4LT8|1|YA|G|2155
4LT8|1|YA|G|2156
4LT8|1|YA|G|2157
4LT8|1|YA|A|2158
4LT8|1|YA|G|2159

Current chains

Chain YA
23S rRNA

Nearby chains

Chain QA
Small subunit ribosomal RNA; SSU rRNA

Coloring options:


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