3D structure

PDB id
4LT8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.14 Å

Loop

Sequence
CGCUGAC*GGUGGAG
Length
14 nucleotides
Bulged bases
4LT8|1|RA|G|932
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LT8_352 not in the Motif Atlas
Homologous match to IL_9DFE_024
Geometric discrepancy: 0.2491
The information below is about IL_9DFE_024
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_68243.1
Basepair signature
cWW-L-cWW-cWW-R-L-tHS-cWW
Number of instances in this motif group
1

Unit IDs

4LT8|1|RA|C|844
4LT8|1|RA|G|845
4LT8|1|RA|C|846
4LT8|1|RA|U|847
4LT8|1|RA|G|848
4LT8|1|RA|A|849
4LT8|1|RA|C|850
*
4LT8|1|RA|G|928
4LT8|1|RA|G|929
4LT8|1|RA|U|930
4LT8|1|RA|G|931
4LT8|1|RA|G|932
4LT8|1|RA|A|933
4LT8|1|RA|G|934

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R3
50S ribosomal protein L29

Coloring options:


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