IL_4N0T_002
3D structure
- PDB id
- 4N0T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Core structure of the U6 small nuclear ribonucleoprotein at 1.7 Angstrom resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.7 Å
Loop
- Sequence
- GAAACAAUACAGAGAUGAUCA*UUUAC
- Length
- 26 nucleotides
- Bulged bases
- 4N0T|1|B|A|49, 4N0T|1|B|U|54, 4N0T|1|B|G|55
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_34739.3
- Basepair signature
- cWW-tWW-tWW-L-R-L-R-L-cWW-L-L-R-L-R-L-R-L-R
- Number of instances in this motif group
- 3
Unit IDs
4N0T|1|B|G|39
4N0T|1|B|A|40
4N0T|1|B|A|41
4N0T|1|B|A|42
4N0T|1|B|C|43
4N0T|1|B|A|44
4N0T|1|B|A|45
4N0T|1|B|U|46
4N0T|1|B|A|47
4N0T|1|B|C|48
4N0T|1|B|A|49
4N0T|1|B|G|50
4N0T|1|B|A|51
4N0T|1|B|G|52
4N0T|1|B|A|53
4N0T|1|B|U|54
4N0T|1|B|G|55
4N0T|1|B|A|56
4N0T|1|B|U|57
4N0T|1|B|C|58
4N0T|1|B|A|59
*
4N0T|1|B|U|88
4N0T|1|B|U|89
4N0T|1|B|U|90
4N0T|1|B|A|91
4N0T|1|B|C|92
Current chains
- Chain B
- U6 snRNA
Nearby chains
- Chain A
- U4/U6 snRNA-associated-splicing factor PRP24
Coloring options: