IL_4NVV_042
3D structure
- PDB id
- 4NVV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGUAAAG*CGAAAAUGAUCGGGGC
- Length
- 23 nucleotides
- Bulged bases
- 4NVV|1|A|U|1072, 4NVV|1|A|A|1173, 4NVV|1|A|U|1176
- QA status
- QA data not found
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05641.1
- Basepair signature
- cWW-tWW-L-tWH-R-R-R-R-R-R-R-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
4NVV|1|A|G|1070
4NVV|1|A|G|1071
4NVV|1|A|U|1072
4NVV|1|A|A|1073
4NVV|1|A|A|1074
4NVV|1|A|A|1075
4NVV|1|A|G|1076
*
4NVV|1|A|C|1170
4NVV|1|A|G|1171
4NVV|1|A|A|1172
4NVV|1|A|A|1173
4NVV|1|A|A|1174
4NVV|1|A|A|1175
4NVV|1|A|U|1176
4NVV|1|A|G|1177
4NVV|1|A|A|1178
4NVV|1|A|U|1179
4NVV|1|A|C|1180
4NVV|1|A|G|1181
4NVV|1|A|G|1182
4NVV|1|A|G|1183
4NVV|1|A|G|1184
4NVV|1|A|C|1185
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 9
- 50S Ribosomal Protein L36
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain E
- 50S Ribosomal Protein L3
- Chain N
- 50S Ribosomal Protein L13
- Chain Q
- 50S Ribosomal Protein L16
Coloring options: