IL_4NVV_090

3D structure

PDB id

4NVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AUC*GGUUU

Length

8 nucleotides

Bulged bases

4NVV|1|A|U|2503

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_74856.2

Basepair signature

cWW-cWW-cSH-R-cWW

Number of instances in this motif group

8

Unit IDs

4NVV|1|A|A|2471
4NVV|1|A|U|2472
4NVV|1|A|C|2473
*
4NVV|1|A|G|2501
4NVV|1|A|G|2502
4NVV|1|A|U|2503
4NVV|1|A|U|2504
4NVV|1|A|U|2505

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 0

50S Ribosomal Protein L27

Chain Q

50S Ribosomal Protein L16