IL_4NVV_101

3D structure

PDB id

4NVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUUCC*GGUAG

Length

10 nucleotides

Bulged bases

4NVV|1|A|U|2701, 4NVV|1|A|C|2702

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69536.3

Basepair signature

cWW-tSH-R-R-cWW

Number of instances in this motif group

4

Unit IDs

4NVV|1|A|U|2699
4NVV|1|A|U|2700
4NVV|1|A|U|2701
4NVV|1|A|C|2702
4NVV|1|A|C|2703
*
4NVV|1|A|G|2731
4NVV|1|A|G|2732
4NVV|1|A|U|2733
4NVV|1|A|A|2734
4NVV|1|A|G|2735

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain E

50S Ribosomal Protein L3

Chain R

50S Ribosomal Protein L17

Chain T

50S Ribosomal Protein L19