IL_4NVV_103

3D structure

PDB id

4NVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAUAAC*GGAAGC

Length

12 nucleotides

Bulged bases

4NVV|1|A|A|2778

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_97057.4

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

7

Unit IDs

4NVV|1|A|G|2750
4NVV|1|A|A|2751
4NVV|1|A|U|2752
4NVV|1|A|A|2753
4NVV|1|A|A|2754
4NVV|1|A|C|2755
*
4NVV|1|A|G|2775
4NVV|1|A|G|2776
4NVV|1|A|A|2777
4NVV|1|A|A|2778
4NVV|1|A|G|2779
4NVV|1|A|C|2780

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 9

50S Ribosomal Protein L36

Chain H

50S Ribosomal Protein L6

Chain N

50S Ribosomal Protein L13