IL_4OO8_006
3D structure
- PDB id
- 4OO8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Streptococcus pyogenes Cas9 in complex with guide RNA and target DNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- GAAAU*ATTTC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4OO8|1|B|G|2
4OO8|1|B|A|3
4OO8|1|B|A|4
4OO8|1|B|A|5
4OO8|1|B|U|6
*
4OO8|1|C|DA|15
4OO8|1|C|DT|16
4OO8|1|C|DT|17
4OO8|1|C|DT|18
4OO8|1|C|DC|19
Current chains
- Chain B
- RNA (97-MER)
- Chain C
- DNA (5'-D(*CP*CP*AP*GP*CP*CP*AP*AP*GP*CP*GP*CP*AP*CP*CP*TP*AP*AP*TP*TP*TP*CP*C)-3')
Nearby chains
- Chain A
- CRISPR-associated endonuclease Cas9/Csn1
Coloring options: