3D structure

PDB id
4P3E (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the human SRP S domain
Experimental method
X-RAY DIFFRACTION
Resolution
3.5 Å

Loop

Sequence
CUAAGUUC*GAUCAGUAG
Length
17 nucleotides
Bulged bases
4P3E|1|A|G|232||A
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4P3E|1|A|C|116
4P3E|1|A|U|117
4P3E|1|A|A|118||A
4P3E|1|A|A|119||A
4P3E|1|A|G|120
4P3E|1|A|U|121
4P3E|1|A|U|122
4P3E|1|A|C|123
*
4P3E|1|A|G|227
4P3E|1|A|A|228
4P3E|1|A|U|229
4P3E|1|A|C|230||A
4P3E|1|A|A|231||A
4P3E|1|A|G|232||A
4P3E|1|A|U|233||A
4P3E|1|A|A|234
4P3E|1|A|G|235

Current chains

Chain A
SRP RNA (124-mer)

Nearby chains

Chain C
Signal recognition particle subunit SRP68

Coloring options:

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