IL_4P3E_008

3D structure

PDB id

4P3E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human SRP S domain

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUAAGUU*AUCAGUAG

Length

15 nucleotides

Bulged bases

4P3E|1|A|G|232||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4P3E|1|A|C|116
4P3E|1|A|U|117
4P3E|1|A|A|118||A
4P3E|1|A|A|119||A
4P3E|1|A|G|120
4P3E|1|A|U|121
4P3E|1|A|U|122
*
4P3E|1|A|A|228
4P3E|1|A|U|229
4P3E|1|A|C|230||A
4P3E|1|A|A|231||A
4P3E|1|A|G|232||A
4P3E|1|A|U|233||A
4P3E|1|A|A|234
4P3E|1|A|G|235

Current chains

Chain A

SRP RNA (124-mer)

Nearby chains

Chain C

Signal recognition particle subunit SRP68