IL_4P6F_043
3D structure
- PDB id
- 4P6F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the peptolide 12C bound to bacterial ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- CG*CUG
- Length
- 5 nucleotides
- Bulged bases
- 4P6F|1|QA|U|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4P6F_043 not in the Motif Atlas
- Homologous match to IL_6CZR_156
- Geometric discrepancy: 0.1377
- The information below is about IL_6CZR_156
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
4P6F|1|QA|C|1060
4P6F|1|QA|G|1061
*
4P6F|1|QA|C|1195
4P6F|1|QA|U|1196
4P6F|1|QA|G|1197
Current chains
- Chain QA
- 16S ribosomal RNA
Nearby chains
- Chain QC
- 30S ribosomal protein S3
- Chain QE
- 30S ribosomal protein S5
- Chain QI
- 30S ribosomal protein S9
- Chain QJ
- 30S ribosomal protein S10
- Chain QN
- 30S ribosomal protein S14 type Z
- Chain QX
- mRNA
- Chain QY
- Transfer RNA; tRNA
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