IL_4P6F_286
3D structure
- PDB id
- 4P6F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the peptolide 12C bound to bacterial ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 4P6F|1|YA|A|1379
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4P6F_286 not in the Motif Atlas
- Homologous match to IL_7RQB_052
- Geometric discrepancy: 0.058
- The information below is about IL_7RQB_052
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
4P6F|1|YA|C|1351
4P6F|1|YA|U|1352
4P6F|1|YA|A|1353
4P6F|1|YA|A|1354
4P6F|1|YA|G|1355
*
4P6F|1|YA|C|1376
4P6F|1|YA|G|1377
4P6F|1|YA|A|1378
4P6F|1|YA|A|1379
4P6F|1|YA|G|1380
Current chains
- Chain YA
- 23S ribosomal RNA
Nearby chains
- Chain Y7
- 50S ribosomal protein L34
- Chain YD
- 50S ribosomal protein L2
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