IL_4P6F_353
3D structure
- PDB id
- 4P6F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the peptolide 12C bound to bacterial ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- CGCUGAC*GGUGGAG
- Length
- 14 nucleotides
- Bulged bases
- 4P6F|1|RA|G|932
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4P6F_353 not in the Motif Atlas
- Homologous match to IL_9DFE_024
- Geometric discrepancy: 0.3154
- The information below is about IL_9DFE_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_68243.1
- Basepair signature
- cWW-L-cWW-cWW-R-L-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
4P6F|1|RA|C|844
4P6F|1|RA|G|845
4P6F|1|RA|C|846
4P6F|1|RA|U|847
4P6F|1|RA|G|848
4P6F|1|RA|A|849
4P6F|1|RA|C|850
*
4P6F|1|RA|G|928
4P6F|1|RA|G|929
4P6F|1|RA|U|930
4P6F|1|RA|G|931
4P6F|1|RA|G|932
4P6F|1|RA|A|933
4P6F|1|RA|G|934
Current chains
- Chain RA
- 23S ribosomal RNA
Nearby chains
- Chain R3
- 50S ribosomal protein L30
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