3D structure

PDB id
4P70 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
CGUAAAG*CG
Length
9 nucleotides
Bulged bases
4P70|1|QA|A|572
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4P70_022 not in the Motif Atlas
Homologous match to IL_4LFB_022
Geometric discrepancy: 0.1307
The information below is about IL_4LFB_022
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_38186.6
Basepair signature
cWW-L-cWW-L-L-R
Number of instances in this motif group
4

Unit IDs

4P70|1|QA|C|569
4P70|1|QA|G|570
4P70|1|QA|U|571
4P70|1|QA|A|572
4P70|1|QA|A|573
4P70|1|QA|A|574
4P70|1|QA|G|575
*
4P70|1|QA|C|880
4P70|1|QA|G|881

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QE
30S ribosomal protein S5
Chain QL
30S ribosomal protein S12
Chain QQ
30S ribosomal protein S17

Coloring options:


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