IL_4P70_137

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

GCGUAGGAUAGG*CCC

Length

15 nucleotides

Bulged bases

4P70|1|RA|C|2111, 4P70|1|RA|G|2112, 4P70|1|RA|U|2113, 4P70|1|RA|G|2115, 4P70|1|RA|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4P70_137 not in the Motif Atlas

Geometric match to IL_3NJ7_003

Geometric discrepancy: 0.2602

The information below is about IL_3NJ7_003

Detailed Annotation

Isolated near basepair

Broad Annotation

Isolated near basepair

Motif group

IL_42997.4

Basepair signature

cWW-cWS-cWW

Number of instances in this motif group

21

Unit IDs

4P70|1|RA|G|2110
4P70|1|RA|C|2111
4P70|1|RA|G|2112
4P70|1|RA|U|2113
4P70|1|RA|A|2114
4P70|1|RA|G|2115
4P70|1|RA|G|2116
4P70|1|RA|A|2117
4P70|1|RA|U|2118
4P70|1|RA|A|2119
4P70|1|RA|G|2120
4P70|1|RA|G|2121
*
4P70|1|RA|C|2177
4P70|1|RA|C|2178
4P70|1|RA|C|2179

Current chains

Chain RA

23S rRNA

Nearby chains