IL_4P70_359

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

UCGUG*CGG

Length

8 nucleotides

Bulged bases

4P70|1|XA|G|64, 4P70|1|XA|U|65

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4P70_359 not in the Motif Atlas

Geometric match to IL_5TBW_145

Geometric discrepancy: 0.3456

The information below is about IL_5TBW_145

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_54650.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

4P70|1|XA|U|62
4P70|1|XA|C|63
4P70|1|XA|G|64
4P70|1|XA|U|65
4P70|1|XA|G|66
*
4P70|1|XA|C|103
4P70|1|XA|G|104
4P70|1|XA|G|105

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XT

30S ribosomal protein S20