IL_4P70_372

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

GGAAG*UGACAAC

Length

12 nucleotides

Bulged bases

4P70|1|YA|C|1544

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4P70_372 not in the Motif Atlas

Homologous match to IL_9DFE_062

Geometric discrepancy: 0.2763

The information below is about IL_9DFE_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_09044.1

Basepair signature

cWW-tSH-tHH-L-tHS-cWW

Number of instances in this motif group

1

Unit IDs

4P70|1|YA|G|1526
4P70|1|YA|G|1527
4P70|1|YA|A|1528
4P70|1|YA|A|1529
4P70|1|YA|G|1530
*
4P70|1|YA|U|1541
4P70|1|YA|G|1542
4P70|1|YA|A|1543
4P70|1|YA|C|1544
4P70|1|YA|A|1545
4P70|1|YA|A|1545|||A
4P70|1|YA|C|1546

Current chains

Chain YA

23S rRNA

Nearby chains