IL_4QCN_013
3D structure
- PDB id
- 4QCN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA- substrates in the A and P sites. This entry contains the 50S subunit of the first 70S ribosome in the ASU.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GAAC*GAGUGAAAUAGAGC
- Length
- 18 nucleotides
- Bulged bases
- 4QCN|1|A|U|529, 4QCN|1|A|G|533
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02359.6
- Basepair signature
- cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
4QCN|1|A|G|507
4QCN|1|A|A|508
4QCN|1|A|A|509
4QCN|1|A|C|510
*
4QCN|1|A|G|521
4QCN|1|A|A|522
4QCN|1|A|G|523
4QCN|1|A|U|524
4QCN|1|A|G|525
4QCN|1|A|A|526
4QCN|1|A|A|527
4QCN|1|A|A|528
4QCN|1|A|U|529
4QCN|1|A|A|530
4QCN|1|A|G|531
4QCN|1|A|A|532
4QCN|1|A|G|533
4QCN|1|A|C|534
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain W
- 50S ribosomal protein L22
- Chain Y
- 50S ribosomal protein L24
Coloring options: