IL_4QVI_004

3D structure

PDB id

4QVI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of mutant ribosomal protein M218L TthL1 in complex with 80nt 23S RNA from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

1.9 Å

Loop

Sequence

CUGUGAAC*GGGAG

Length

13 nucleotides

Bulged bases

4QVI|1|B|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02471.1

Basepair signature

cWW-tSS-L-tSH-tSS-tHS-tHS-cWW

Number of instances in this motif group

41

Unit IDs

4QVI|1|B|C|2129
4QVI|1|B|U|2130
4QVI|1|B|G|2131
4QVI|1|B|U|2132
4QVI|1|B|G|2133
4QVI|1|B|A|2134
4QVI|1|B|A|2135
4QVI|1|B|C|2136
*
4QVI|1|B|G|2155
4QVI|1|B|G|2156
4QVI|1|B|G|2157
4QVI|1|B|A|2158
4QVI|1|B|G|2159

Current chains

Chain B

fragment of 23S rRNA

Nearby chains

Chain A

50S ribosomal protein L1