IL_4R4V_003

3D structure

PDB id

4R4V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the VS ribozyme - G638A mutant

Experimental method

X-RAY DIFFRACTION

Resolution

3.07 Å

Loop

Sequence

CAG*CG

Length

5 nucleotides

Bulged bases

4R4V|1|A|A|652

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

129

Unit IDs

4R4V|1|A|C|651
4R4V|1|A|A|652
4R4V|1|A|G|653
*
4R4V|1|A|C|766
4R4V|1|A|G|767

Current chains

Chain A

VS ribozyme RNA

Nearby chains