3D structure

PDB id
4TUA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
GAAC*GAGUGAAAUAGAGC
Length
18 nucleotides
Bulged bases
4TUA|1|RA|U|504, 4TUA|1|RA|G|508
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4TUA_073 not in the Motif Atlas
Geometric match to IL_7RQB_014
Geometric discrepancy: 0.0687
The information below is about IL_7RQB_014
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_60992.6
Basepair signature
cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L
Number of instances in this motif group
6

Unit IDs

4TUA|1|RA|G|481
4TUA|1|RA|A|482
4TUA|1|RA|A|483
4TUA|1|RA|C|484
*
4TUA|1|RA|G|496
4TUA|1|RA|A|497
4TUA|1|RA|G|498
4TUA|1|RA|U|499
4TUA|1|RA|G|500
4TUA|1|RA|A|501
4TUA|1|RA|A|502
4TUA|1|RA|A|503
4TUA|1|RA|U|504
4TUA|1|RA|A|505
4TUA|1|RA|G|506
4TUA|1|RA|A|507
4TUA|1|RA|G|508
4TUA|1|RA|C|509

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RW
50S ribosomal protein L22
Chain RY
50S ribosomal protein L24

Coloring options:


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