3D structure

PDB id
4TUA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
UUUCC*GGUAG
Length
10 nucleotides
Bulged bases
4TUA|1|RA|U|2689, 4TUA|1|RA|C|2690
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4TUA_160 not in the Motif Atlas
Homologous match to IL_7RQB_105
Geometric discrepancy: 0.0932
The information below is about IL_7RQB_105
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_08296.3
Basepair signature
cWW-L-tHS-L-cWW
Number of instances in this motif group
4

Unit IDs

4TUA|1|RA|U|2687
4TUA|1|RA|U|2688
4TUA|1|RA|U|2689
4TUA|1|RA|C|2690
4TUA|1|RA|C|2691
*
4TUA|1|RA|G|2718
4TUA|1|RA|G|2719
4TUA|1|RA|U|2720
4TUA|1|RA|A|2721
4TUA|1|RA|G|2722

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RE
50S ribosomal protein L3
Chain RR
50S ribosomal protein L17
Chain RT
50S ribosomal protein L19

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.5182 s