3D structure

PDB id
4TUA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
GCA*UUCCC
Length
8 nucleotides
Bulged bases
4TUA|1|XA|C|934
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4TUA_207 not in the Motif Atlas
Homologous match to IL_4LFB_037
Geometric discrepancy: 0.1158
The information below is about IL_4LFB_037
Detailed Annotation
Minor groove platform
Broad Annotation
No text annotation
Motif group
IL_61370.1
Basepair signature
cWW-cWS-L-cWW-L
Number of instances in this motif group
4

Unit IDs

4TUA|1|XA|G|933
4TUA|1|XA|C|934
4TUA|1|XA|A|935
*
4TUA|1|XA|U|1380
4TUA|1|XA|U|1381
4TUA|1|XA|C|1382
4TUA|1|XA|C|1383
4TUA|1|XA|C|1384

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XG
30S ribosomal protein S7
Chain XI
30S ribosomal protein S9
Chain XV
Transfer RNA; tRNA

Coloring options:


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