3D structure

PDB id
4TUA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
UACAAAG*CAAAAAG
Length
14 nucleotides
Bulged bases
4TUA|1|XA|A|1286
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4TUA_217 not in the Motif Atlas
Homologous match to IL_4LFB_051
Geometric discrepancy: 0.0804
The information below is about IL_4LFB_051
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_12056.1
Basepair signature
cWW-L-R-R-bif-cWW
Number of instances in this motif group
2

Unit IDs

4TUA|1|XA|U|1247
4TUA|1|XA|A|1248
4TUA|1|XA|C|1249
4TUA|1|XA|A|1250
4TUA|1|XA|A|1251
4TUA|1|XA|A|1252
4TUA|1|XA|G|1253
*
4TUA|1|XA|C|1284
4TUA|1|XA|A|1285
4TUA|1|XA|A|1286
4TUA|1|XA|A|1287
4TUA|1|XA|A|1288
4TUA|1|XA|A|1289
4TUA|1|XA|G|1290

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XG
30S ribosomal protein S7
Chain XI
30S ribosomal protein S9
Chain XJ
30S ribosomal protein S10
Chain XN
30S ribosomal protein S14 type Z
Chain XU
30S ribosomal protein Thx

Coloring options:


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