IL_4TUA_272

3D structure

PDB id

4TUA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGAAGACAG*UCGAG

Length

14 nucleotides

Bulged bases

4TUA|1|YA|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUA_272 not in the Motif Atlas

Homologous match to IL_5J7L_284

Geometric discrepancy: 0.2577

The information below is about IL_5J7L_284

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_99692.2

Basepair signature

cWW-tSS-tSH-L-R-R-L-cWW-L-L

Number of instances in this motif group

6

Unit IDs

4TUA|1|YA|C|1043
4TUA|1|YA|G|1044
4TUA|1|YA|A|1045
4TUA|1|YA|A|1046
4TUA|1|YA|G|1047
4TUA|1|YA|A|1048
4TUA|1|YA|C|1049
4TUA|1|YA|A|1050
4TUA|1|YA|G|1051
*
4TUA|1|YA|U|1108
4TUA|1|YA|C|1109
4TUA|1|YA|G|1110
4TUA|1|YA|A|1111
4TUA|1|YA|G|1112

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YH

50S ribosomal protein L6