IL_4TUB_016

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UG*UGA

Length

5 nucleotides

Bulged bases

4TUB|1|QA|G|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUB_016 not in the Motif Atlas

Geometric match to IL_4LFB_016

Geometric discrepancy: 0.1073

The information below is about IL_4LFB_016

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

4TUB|1|QA|U|375
4TUB|1|QA|G|376
*
4TUB|1|QA|U|387
4TUB|1|QA|G|388
4TUB|1|QA|A|389

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QP

30S ribosomal protein S16