IL_4TUB_065
3D structure
- PDB id
- 4TUB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAACUG*CUCAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4TUB_065 not in the Motif Atlas
- Geometric match to IL_7RQB_006
- Geometric discrepancy: 0.0534
- The information below is about IL_7RQB_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.7
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
4TUB|1|RA|G|177
4TUB|1|RA|G|178
4TUB|1|RA|A|179
4TUB|1|RA|A|180
4TUB|1|RA|C|181
4TUB|1|RA|U|182
4TUB|1|RA|G|183
*
4TUB|1|RA|C|190
4TUB|1|RA|U|191
4TUB|1|RA|C|192
4TUB|1|RA|A|193
4TUB|1|RA|G|194
4TUB|1|RA|U|195
4TUB|1|RA|A|196
4TUB|1|RA|C|197
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R1
- 50S ribosomal protein L28
- Chain R7
- 50S ribosomal protein L34
- Chain R8
- 50S ribosomal protein L35
- Chain RP
- 50S ribosomal protein L15
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