IL_4TUB_071

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UAG*CGAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUB_071 not in the Motif Atlas

Homologous match to IL_7RQB_013

Geometric discrepancy: 0.0985

The information below is about IL_7RQB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

4TUB|1|RA|U|317
4TUB|1|RA|A|318
4TUB|1|RA|G|319
*
4TUB|1|RA|C|367
4TUB|1|RA|G|368
4TUB|1|RA|A|369
4TUB|1|RA|A|370
4TUB|1|RA|A|371

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RY

50S ribosomal protein L24