IL_4TUB_076
3D structure
- PDB id
- 4TUB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GAAAC*GAGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 4TUB|1|RA|G|848, 4TUB|1|RA|G|852
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4TUB_076 not in the Motif Atlas
- Homologous match to IL_4WF9_021
- Geometric discrepancy: 0.0966
- The information below is about IL_4WF9_021
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_54041.2
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
4TUB|1|RA|G|721
4TUB|1|RA|A|722
4TUB|1|RA|A|723
4TUB|1|RA|A|724
4TUB|1|RA|C|725
*
4TUB|1|RA|G|846
4TUB|1|RA|A|847
4TUB|1|RA|G|848
4TUB|1|RA|A|849
4TUB|1|RA|U|850
4TUB|1|RA|A|851
4TUB|1|RA|G|852
4TUB|1|RA|C|853
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain RF
- 50S ribosomal protein L4
- Chain RP
- 50S ribosomal protein L15
Coloring options: