IL_4TUB_077

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

4TUB|1|RA|A|811

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUB_077 not in the Motif Atlas

Geometric match to IL_4WF9_022

Geometric discrepancy: 0.0799

The information below is about IL_4WF9_022

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

4TUB|1|RA|C|744
4TUB|1|RA|C|745
*
4TUB|1|RA|G|810
4TUB|1|RA|A|811
4TUB|1|RA|G|812

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RD

50S ribosomal protein L2