IL_4TUB_110

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUB_110 not in the Motif Atlas

Homologous match to IL_5J7L_295

Geometric discrepancy: 0.1229

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

4TUB|1|RA|C|1463
4TUB|1|RA|G|1464
4TUB|1|RA|A|1465
4TUB|1|RA|U|1466
4TUB|1|RA|G|1467
*
4TUB|1|RA|C|1624
4TUB|1|RA|U|1625
4TUB|1|RA|A|1626
4TUB|1|RA|A|1627
4TUB|1|RA|G|1628

Current chains

Chain RA

23S rRNA

Nearby chains