IL_4TUB_132
3D structure
- PDB id
- 4TUB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 4TUB|1|RA|A|1960, 4TUB|1|RA|U|1966
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4TUB_132 not in the Motif Atlas
- Homologous match to IL_7A0S_072
- Geometric discrepancy: 0.1501
- The information below is about IL_7A0S_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.3
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 2
Unit IDs
4TUB|1|RA|C|1956
4TUB|1|RA|G|1957
4TUB|1|RA|A|1958
4TUB|1|RA|A|1959
4TUB|1|RA|A|1960
4TUB|1|RA|U|1961
4TUB|1|RA|U|1962
4TUB|1|RA|C|1963
4TUB|1|RA|C|1964
4TUB|1|RA|U|1965
4TUB|1|RA|U|1966
4TUB|1|RA|G|1967
*
4TUB|1|RA|C|1983
4TUB|1|RA|C|1984
4TUB|1|RA|U|1985
4TUB|1|RA|G|1986
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain QA
- Small subunit ribosomal RNA; SSU rRNA
- Chain RD
- 50S ribosomal protein L2
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