3D structure

PDB id
4TUB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
CGG*CCCG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4TUB_345 not in the Motif Atlas
Geometric match to IL_5TBW_056
Geometric discrepancy: 0.3457
The information below is about IL_5TBW_056
Detailed Annotation
Major groove platform with extra cWW
Broad Annotation
Major groove platform
Motif group
IL_63959.1
Basepair signature
cWW-cSH-cWW-cWW
Number of instances in this motif group
18

Unit IDs

4TUB|1|QA|C|656
4TUB|1|QA|G|657
4TUB|1|QA|G|658
*
4TUB|1|QA|C|747
4TUB|1|QA|C|748
4TUB|1|QA|C|749
4TUB|1|QA|G|750

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QO
30S ribosomal protein S15

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2638 s