IL_4TUC_074

3D structure

PDB id

4TUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UUAAG*CGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUC_074 not in the Motif Atlas

Homologous match to IL_4WF9_019

Geometric discrepancy: 0.1137

The information below is about IL_4WF9_019

Detailed Annotation

AAA cross-strand stack

Broad Annotation

AAA cross-strand stack

Motif group

IL_17136.3

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

23

Unit IDs

4TUC|1|RA|U|606
4TUC|1|RA|U|607
4TUC|1|RA|A|608
4TUC|1|RA|A|609
4TUC|1|RA|G|609|||A
*
4TUC|1|RA|C|618|||A
4TUC|1|RA|G|619
4TUC|1|RA|G|620
4TUC|1|RA|A|621
4TUC|1|RA|G|622

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RF

50S ribosomal protein L4

Chain RP

50S ribosomal protein L15