IL_4TUC_205

3D structure

PDB id

4TUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UGA*UACA

Length

7 nucleotides

Bulged bases

4TUC|1|XA|A|1394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUC_205 not in the Motif Atlas

Geometric match to IL_4KYY_002

Geometric discrepancy: 0.2932

The information below is about IL_4KYY_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_71625.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

78

Unit IDs

4TUC|1|XA|U|921
4TUC|1|XA|G|922
4TUC|1|XA|A|923
*
4TUC|1|XA|U|1393
4TUC|1|XA|A|1394
4TUC|1|XA|C|1395
4TUC|1|XA|A|1396

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XE

30S ribosomal protein S5