IL_4TUC_207

3D structure

PDB id

4TUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GCA*UUCCC

Length

8 nucleotides

Bulged bases

4TUC|1|XA|C|934

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUC_207 not in the Motif Atlas

Homologous match to IL_4LFB_037

Geometric discrepancy: 0.1339

The information below is about IL_4LFB_037

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_61370.1

Basepair signature

cWW-cWS-L-cWW-L

Number of instances in this motif group

4

Unit IDs

4TUC|1|XA|G|933
4TUC|1|XA|C|934
4TUC|1|XA|A|935
*
4TUC|1|XA|U|1380
4TUC|1|XA|U|1381
4TUC|1|XA|C|1382
4TUC|1|XA|C|1383
4TUC|1|XA|C|1384

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XG

30S ribosomal protein S7

Chain XI

30S ribosomal protein S9

Chain XV

Transfer RNA; tRNA