IL_4TUC_325

3D structure

PDB id

4TUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CG*UGG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUC_325 not in the Motif Atlas

Homologous match to IL_7RQB_096

Geometric discrepancy: 0.0815

The information below is about IL_7RQB_096

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_76223.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

10

Unit IDs

4TUC|1|YA|C|2507
4TUC|1|YA|G|2508
*
4TUC|1|YA|U|2580
4TUC|1|YA|G|2581
4TUC|1|YA|G|2582

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y5

50S ribosomal protein L32

Chain YE

50S ribosomal protein L3

Chain Z6

CC-Puro