3D structure

PDB id
4TUC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
CGCUGAC*GGUGGAG
Length
14 nucleotides
Bulged bases
4TUC|1|RA|G|932
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4TUC_347 not in the Motif Atlas
Homologous match to IL_9DFE_024
Geometric discrepancy: 0.2714
The information below is about IL_9DFE_024
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_68243.1
Basepair signature
cWW-L-cWW-cWW-R-L-tHS-cWW
Number of instances in this motif group
1

Unit IDs

4TUC|1|RA|C|844
4TUC|1|RA|G|845
4TUC|1|RA|C|846
4TUC|1|RA|U|847
4TUC|1|RA|G|848
4TUC|1|RA|A|849
4TUC|1|RA|C|850
*
4TUC|1|RA|G|928
4TUC|1|RA|G|929
4TUC|1|RA|U|930
4TUC|1|RA|G|931
4TUC|1|RA|G|932
4TUC|1|RA|A|933
4TUC|1|RA|G|934

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R3
50S ribosomal protein L30

Coloring options:


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