IL_4TUD_285

3D structure

PDB id

4TUD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUD_285 not in the Motif Atlas

Homologous match to IL_7RQB_055

Geometric discrepancy: 0.1129

The information below is about IL_7RQB_055

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

4TUD|1|YA|C|1417
4TUD|1|YA|G|1418
4TUD|1|YA|A|1419
4TUD|1|YA|U|1420
4TUD|1|YA|G|1421
*
4TUD|1|YA|C|1577
4TUD|1|YA|U|1578
4TUD|1|YA|A|1579
4TUD|1|YA|A|1580
4TUD|1|YA|G|1581

Current chains

Chain YA

23S rRNA

Nearby chains