IL_4TUE_019

3D structure

PDB id

4TUE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GAAACC*GACUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUE_019 not in the Motif Atlas

Geometric match to IL_4LFB_019

Geometric discrepancy: 0.1344

The information below is about IL_4LFB_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31561.1

Basepair signature

cWW-L-R-tWH-tWH-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

4TUE|1|QA|G|450
4TUE|1|QA|A|451
4TUE|1|QA|A|452
4TUE|1|QA|A|453
4TUE|1|QA|C|454
4TUE|1|QA|C|455
*
4TUE|1|QA|G|477
4TUE|1|QA|A|478
4TUE|1|QA|C|479
4TUE|1|QA|U|480
4TUE|1|QA|G|481
4TUE|1|QA|A|482
4TUE|1|QA|C|483

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QP

30S ribosomal protein S16

Chain YI

50S ribosomal protein L9