IL_4TUE_292

3D structure

PDB id

4TUE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGAAG*UGACAAC

Length

12 nucleotides

Bulged bases

4TUE|1|YA|C|1544

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUE_292 not in the Motif Atlas

Homologous match to IL_7RQB_063

Geometric discrepancy: 0.1702

The information below is about IL_7RQB_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02656.1

Basepair signature

cWW-L-R-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

4TUE|1|YA|G|1526
4TUE|1|YA|G|1527
4TUE|1|YA|A|1528
4TUE|1|YA|A|1529
4TUE|1|YA|G|1530
*
4TUE|1|YA|U|1541
4TUE|1|YA|G|1542
4TUE|1|YA|A|1543
4TUE|1|YA|C|1544
4TUE|1|YA|A|1545
4TUE|1|YA|A|1545|||A
4TUE|1|YA|C|1546

Current chains

Chain YA

23S rRNA

Nearby chains