Motif IL_02656.1 Version IL_02656.1 of this group appears in releases 3.77 to 3.86
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-9 | 4-8 | 5-8 | 6-7 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_7RQB_063 | 7RQB | 0.7252 | 1 | 1A | LSU rRNA | U | 1540 | G | 1541 | A | 1542 | A | 1544 | A | 1545 | C | 1546 | * | G | 1526 | G | 1527 | A | 1528 | A | 1528|||A | G | 1529 | cWW | tSH | tHH | tHS | cWW | ||
| 2 | IL_5XTM_002 | 5XTM | 0.0000 | 1 | Other IL | B | RNA (47-MER) | G | 8 | A | 9 | U | 10 | G | 11 | A | 12 | A | 14 | * | U | 35 | A | 36 | A | 37 | C | 38 | C | 39 | cWW | ncWWa | tSH | cBW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGACAAC*GGAAG | 1 |
| GAUGAAA*UAACC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GACAA*GAA | 1 |
| AUGAA*AAC | 1 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Other IL (1)
- (1)
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW
- Heat map statistics
- Min 0.73 | Avg 0.36 | Max 0.73
Coloring options: