IL_4TZP_011
3D structure
- PDB id
- 4TZP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- As Grown, Untreated Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its cognate tRNAGly, and B. subtilis YbxF protein
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 8.5 Å
Loop
- Sequence
- GAUUU*AAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4TZP_011 not in the Motif Atlas
- Geometric match to IL_7EL1_001
- Geometric discrepancy: 0.3675
- The information below is about IL_7EL1_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70784.1
- Basepair signature
- cWW-cWW-cSH-cWW-L
- Number of instances in this motif group
- 7
Unit IDs
4TZP|1|F|G|28
4TZP|1|F|A|29
4TZP|1|F|U|30
4TZP|1|F|U|31
4TZP|1|F|U|32
*
4TZP|1|F|A|76
4TZP|1|F|A|77
4TZP|1|F|C|78
Current chains
- Chain F
- glyQ T-box Stem I
Nearby chains
- Chain E
- Transfer RNA; tRNA
Coloring options: