IL_4TZZ_005
3D structure
- PDB id
- 4TZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate and increasing PEG3350 concentration from 20% to 45% post crystallization
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.64 Å
Loop
- Sequence
- AUGAUUAGCGAC*GGAU
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70108.1
- Basepair signature
- cWW-L-R-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
4TZZ|1|C|A|36
4TZZ|1|C|U|37
4TZZ|1|C|G|38
4TZZ|1|C|A|39
4TZZ|1|C|U|40
4TZZ|1|C|U|41
4TZZ|1|C|A|42
4TZZ|1|C|G|43
4TZZ|1|C|C|44
4TZZ|1|C|G|45
4TZZ|1|C|A|46
4TZZ|1|C|C|47
*
4TZZ|1|C|G|69
4TZZ|1|C|G|70
4TZZ|1|C|A|71
4TZZ|1|C|U|72
Current chains
- Chain C
- T-box Stem I RNA
Nearby chains
- Chain B
- Transfer RNA; tRNA
- Chain J
- Ribosome-associated protein L7Ae-like
- Chain L
- T-box Stem I RNA
Coloring options: