IL_4U1U_095

3D structure

PDB id

4U1U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to quinupristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

4U1U|1|BA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4U1U_095 not in the Motif Atlas

Homologous match to IL_5J7L_275

Geometric discrepancy: 0.305

The information below is about IL_5J7L_275

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_29366.1

Basepair signature

cWW-cWW

Number of instances in this motif group

266

Unit IDs

4U1U|1|BA|G|880
4U1U|1|BA|G|881
*
4U1U|1|BA|U|895
4U1U|1|BA|A|896
4U1U|1|BA|C|897

Current chains

Chain BA

23S rRNA

Nearby chains