IL_4U1V_251

3D structure

PDB id

4U1V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UAG*CAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4U1V_251 not in the Motif Atlas

Homologous match to IL_5J7L_254

Geometric discrepancy: 0.1284

The information below is about IL_5J7L_254

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.3

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

4U1V|1|DA|U|293
4U1V|1|DA|A|294
4U1V|1|DA|G|295
*
4U1V|1|DA|C|343
4U1V|1|DA|A|344
4U1V|1|DA|A|345
4U1V|1|DA|A|346
4U1V|1|DA|A|347

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DU

50S ribosomal protein L24