IL_4U20_150
3D structure
- PDB id
- 4U20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to flopristin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGUAGGAUAGGUG*CACCC
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U20_150 not in the Motif Atlas
- Geometric match to IL_7VYX_004
- Geometric discrepancy: 0.3208
- The information below is about IL_7VYX_004
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
4U20|1|BA|G|2110
4U20|1|BA|U|2111
4U20|1|BA|G|2112
4U20|1|BA|U|2113
4U20|1|BA|A|2114
4U20|1|BA|G|2115
4U20|1|BA|G|2116
4U20|1|BA|A|2117
4U20|1|BA|U|2118
4U20|1|BA|A|2119
4U20|1|BA|G|2120
4U20|1|BA|G|2121
4U20|1|BA|U|2122
4U20|1|BA|G|2123
*
4U20|1|BA|C|2175
4U20|1|BA|A|2176
4U20|1|BA|C|2177
4U20|1|BA|C|2178
4U20|1|BA|C|2179
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain B5
- 50S ribosomal protein L1
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